Package: ldaPrototype 0.3.1

ldaPrototype: Prototype of Multiple Latent Dirichlet Allocation Runs

Determine a Prototype from a number of runs of Latent Dirichlet Allocation (LDA) measuring its similarities with S-CLOP: A procedure to select the LDA run with highest mean pairwise similarity, which is measured by S-CLOP (Similarity of multiple sets by Clustering with Local Pruning), to all other runs. LDA runs are specified by its assignments leading to estimators for distribution parameters. Repeated runs lead to different results, which we encounter by choosing the most representative LDA run as prototype.

Authors:Jonas Rieger [aut, cre]

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ldaPrototype.pdf |ldaPrototype.html
ldaPrototype/json (API)

# Install 'ldaPrototype' in R:
install.packages('ldaPrototype', repos = c('https://jonasrieger.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/jonasrieger/ldaprototype/issues

Datasets:

On CRAN:

latent-dirichlet-allocationldamodel-selectionmodelselectionreliabilitytext-miningtextdatatopic-modeltopic-modelstopic-similaritiestopicmodelingtopicmodelling

46 exports 7 stars 1.47 score 53 dependencies 1 dependents 23 scripts 343 downloads

Last updated 2 years agofrom:3240581a9c. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 23 2024
R-4.5-winOKAug 23 2024
R-4.5-linuxOKAug 23 2024
R-4.4-winOKAug 23 2024
R-4.4-macOKAug 23 2024
R-4.3-winOKAug 23 2024
R-4.3-macOKAug 23 2024

Exports:as.LDAas.LDABatchas.LDARepcosineTopicsdendTopicsdisparitySumgetAlphagetAssignmentsgetConsideredWordsgetDocument_expectsgetDocument_sumsgetEstimatorsgetEtagetIDgetJobgetKgetLDAgetLog.likelihoodsgetMergedTopicsgetNum.iterationsgetParamgetPrototypegetPrototypeIDgetRegistrygetRelevantWordsgetSCLOPgetSimilaritygetTopicsis.LDAis.LDABatchis.LDARepjaccardTopicsjsTopicsLDALDABatchLDAPrototypeLDARepmergeBatchTopicsmergeRepTopicsmergeTopicspruneSCLOPpruning.parrboTopicsSCLOPSCLOP.pairwisesetFileDir

Dependencies:backportsbase64urlbatchtoolsBBmiscbrewcheckmateclicodetoolscolorspacecrayondata.tabledendextenddigestfansifarverfsfutureggplot2globalsgluegridExtragtablehmsisobandlabelinglatticeldalifecyclelistenvmagrittrMASSMatrixmgcvmunsellnlmeparallellyparallelMappillarpkgconfigprettyunitsprogressR6rappdirsRColorBrewerrlangscalesstringitibbleutf8vctrsviridisviridisLitewithr

Readme and manuals

Help Manual

Help pageTopics
ldaPrototype: Prototype of Multiple Latent Dirichlet Allocation RunsldaPrototype-package ldaPrototype
LDABatch Constructoras.LDABatch is.LDABatch
LDARep Constructoras.LDARep as.LDARep.default as.LDARep.LDARep is.LDARep
Pairwise Cosine SimilaritiescosineTopics
Topic DendrogramdendTopics plot.TopicDendrogram
Getter and Setter for LDARep and LDABatchgetID getJob getLDA getRegistry setFileDir
Determine the Prototype LDAgetPrototype getPrototype.default getPrototype.LDABatch getPrototype.LDARep
Getter for PrototypeLDAgetConsideredWords.PrototypeLDA getID.PrototypeLDA getJob.PrototypeLDA getLDA.PrototypeLDA getMergedTopics getParam.PrototypeLDA getPrototypeID getRelevantWords.PrototypeLDA getSCLOP getSimilarity.PrototypeLDA
Getter for TopicSimilaritygetConsideredWords getParam.TopicSimilarity getRelevantWords getSimilarity
Getter for LDAgetAlpha getAssignments getDocument_expects getDocument_sums getEstimators getEta getK getLog.likelihoods getNum.iterations getParam getTopics
Pairwise Jaccard CoefficientsjaccardTopics
Pairwise Jensen-Shannon Similarities (Divergences)jsTopics
LDA Objectas.LDA is.LDA LDA
LDA Replications on a Batch SystemLDABatch
Determine the Prototype LDALDAPrototype
LDA ReplicationsLDARep
Merge LDA Topic MatricesmergeBatchTopics mergeBatchTopics.default mergeBatchTopics.LDABatch
Merge LDA Topic MatricesmergeRepTopics mergeRepTopics.default mergeRepTopics.LDARep
Merge LDA Topic MatricesmergeTopics
Local Pruning State of Topic Dendrogramsplot.PruningSCLOP pruneSCLOP pruning.par
Pairwise RBO SimilaritiesrboTopics
A Snippet of the Reuters Datasetdocs reuters reuters_docs reuters_vocab vocab
Similarity/Stability of multiple sets of Objects using Clustering with Local PruningdisparitySum SCLOP SCLOP.pairwise